Basic Information
Locus ID:
Sp6g39110.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 10500906 | 10504720 | - | Sp6g39110.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 102,849.45 Da | 47.47 | 75.83 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 539 | 896 | 1.42052E-166 | - |
| Pfam | PF00069 | Protein kinase domain | 775 | 878 | 2.2E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 542 | 692 | 3.3E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 529 | 894 | 1.71E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 621 | 689 | 2.1E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 539 | 620 | 2.1E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 887 | 8.9E-38 | - |
| SMART | SM00220 | serkin_6 | 541 | 878 | 1.0E-89 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 541 | 878 | 43.000587 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 662 | 674 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 116 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03640.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006398819.1 | protein kinase PVPK-1 [Eutrema salsugineum] | 0 |
| Q9SJM3 | Serine/threonine-protein kinase KIPK2 OS=Arabidopsis thaliana OX=3702 GN=KIPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565CHE9 | Protein kinase domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS23531 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G03640.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012602m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g39110.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g056920.2N |