Basic Information
Locus ID:
Sp6g37690.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 9945642 | 9947038 | + | Sp6g37690.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 41,143.08 Da | 34.71 | 94.74 | -0.07 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05150.1 | autophagy-related gene 18E. | 0 |
| RefSeq | XP_009130869.1 | autophagy-related protein 18e [Brassica rapa] | 0 |
| Q9FHK8 | Autophagy-related protein 18e OS=Arabidopsis thaliana OX=3702 GN=ATG18E PE=2 SV=1 | 0 | |
| TrEMBL | M4CNQ6 | WD_REPEATS_REGION domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G05150.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015259m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g37690.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g002090.2N |