Basic Information
Locus ID:
Sp6g36400.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
UBA2
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 9521808 | 9528432 | - | Sp6g36400.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 119,094.81 Da | 36.63 | 86.13 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 485 | 1024 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 68 | 453 | 4.9346E-153 | - |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 316 | 384 | 2.5E-22 | IPR032420 |
| Pfam | PF00899 | ThiF family | 70 | 444 | 2.6E-30 | IPR000594 |
| Pfam | PF00899 | ThiF family | 466 | 965 | 4.6E-74 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 977 | 1066 | 5.9E-24 | IPR018965 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 653 | 906 | 1.5E-82 | IPR019572 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 243 | 314 | 1.3E-26 | IPR032418 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 461 | 961 | 6.97E-129 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 63 | 450 | 3.66E-96 | IPR035985 |
| Gene3D | G3DSA:1.10.10.2660 | - | 638 | 913 | 2.5E-191 | IPR042063 |
| Gene3D | G3DSA:3.40.50.720 | - | 486 | 964 | 2.5E-191 | - |
| Gene3D | G3DSA:3.50.50.80 | - | 59 | 177 | 4.5E-37 | IPR042449 |
| Gene3D | G3DSA:3.10.290.60 | - | 979 | 1069 | 6.8E-23 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 187 | 476 | 2.3E-112 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 231 | 312 | 2.3E-112 | IPR042302 |
| SMART | SM00985 | UBA_e1_C_a_2 | 944 | 1066 | 2.0E-54 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 63 | 1070 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 645 | 653 | - | IPR033127 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 428 | 436 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 205 | 232 | 3.7E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 560 | 585 | 3.7E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 90 | 114 | 3.7E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 714 | 741 | 3.7E-66 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 513 | 536 | 3.7E-66 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_006399119.1 | ubiquitin-activating enzyme E1 2 [Eutrema salsugineum] | 0 |
| P92974 | Ubiquitin-activating enzyme E1 2 OS=Arabidopsis thaliana OX=3702 GN=UBA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A565CIC9 | E1 ubiquitin-activating enzyme OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS23894 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology