Basic Information
Locus ID:
Sp6g32190.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 8019107 | 8021015 | + | Sp6g32190.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 37,751.96 Da | 45.95 | 88.44 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 79 | 323 | 2.0E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 326 | 7.44E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 334 | 2.8E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 25 | 136 | 2.0E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 51 | 330 | 25.502695 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G11410.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006399645.1 | putative inactive serine/threonine-protein kinase At5g11400 [Eutrema salsugineum] | 0 |
| Q9LFL6 | Inactive serine/threonine-protein kinase BKN2 OS=Arabidopsis thaliana OX=3702 GN=BKN2 PE=1 SV=1 | 0 | |
| TrEMBL | V4LMN9 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10014040mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G11400.2, AT5G11410.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10014040m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g32190.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g005150.2N |