Basic Information
Locus ID:
Sp6g30150.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 7210843 | 7212254 | - | Sp6g30150.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.38 | 22,347.45 Da | 43.27 | 76.59 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 171 | 207 | 6.81571E-17 | - |
| Pfam | PF01849 | NAC domain | 60 | 115 | 1.6E-23 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 169 | 207 | 1.8E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 169 | 206 | 9.1E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 66 | 119 | 3.3E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 60 | 116 | 6.2E-28 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 26 | 208 | 2.0E-66 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 57 | 122 | 18.22831 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 45 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13850.1 | nascent polypeptide-associated complex subunit alpha-like protein 3. | 0 |
| RefSeq | XP_009121721.1 | nascent polypeptide-associated complex subunit alpha-like protein 3 isoform X2 [Brassica rapa] | 0 |
| Q6ICZ8 | Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g13850 PE=1 SV=1 | 0 | |
| TrEMBL | M4CX50 | NAC-A/B domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology