Basic Information
Locus ID:
Sp6g29520.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 7014609 | 7017117 | + | Sp6g29520.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.47 | 50,214.41 Da | 41.19 | 74.71 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 129 | 266 | 1.0E-18 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 115 | 284 | 2.88E-34 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 137 | 289 | 1.4E-24 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 128 | 284 | 29.913094 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 314 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14490.4 | - | 0 |
| RefSeq | XP_020878607.1 | SUPPRESSOR OF GAMMA RESPONSE 1 isoform X3 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | D7M6K1 | Predicted protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_661286 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology