Basic Information
Locus ID:
Sp6g29410.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
DRM2
Description:
Domains rearranged methyltransferase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 6969236 | 6973186 | + | Sp6g29410.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 66,608.52 Da | 43.88 | 83.24 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 469 | 584 | 4.5E-10 | IPR001525 |
| SUPERFAMILY | SSF46934 | UBA-like | 65 | 120 | 9.41E-6 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 468 | 585 | 4.76E-17 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 151 | 193 | 7.66E-5 | IPR009060 |
| SUPERFAMILY | SSF46934 | UBA-like | 8 | 61 | 6.18E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 273 | 465 | 3.6E-21 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 266 | 355 | 1.3E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 460 | 594 | 7.5E-28 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 20 | 68 | 3.4E-6 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 69 | 120 | 1.9E-7 | - |
| SMART | SM00165 | uba_6 | 30 | 65 | 9.4 | IPR015940 |
| SMART | SM00165 | uba_6 | 162 | 201 | 1.3 | IPR015940 |
| SMART | SM00165 | uba_6 | 80 | 118 | 1.5 | IPR015940 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 468 | 595 | 20.729662 | IPR001525 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 263 | 592 | 134.234589 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 28 | 62 | 8.932329 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 78 | 119 | 11.076971 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 241 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_033137807.1 | DNA (cytosine-5)-methyltransferase DRM2 isoform X2 [Brassica rapa] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | M4CX02 | SAM-dependent MTase DRM-type domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology