Basic Information
Locus ID:
Sp6g17710.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 2381937 | 2383964 | + | Sp6g17710.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 74,800.30 Da | 39.80 | 90.22 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 365 | 635 | 5.09523E-97 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 30 | 265 | 1.73258E-88 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 30 | 274 | 4.5E-62 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 359 | 631 | 8.2E-51 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 29 | 273 | 7.0E-62 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 652 | 2.02E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 27 | 282 | 3.9E-67 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 436 | 653 | 6.4E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 435 | 2.6E-29 | - |
| SMART | SM00220 | serkin_6 | 359 | 632 | 1.7E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 649 | 39.339882 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 365 | 388 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 483 | 495 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_006401411.1 | probable L-type lectin-domain containing receptor kinase S.7 [Eutrema salsugineum] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | V4LGJ2 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10012869mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology