Basic Information
Locus ID:
Sp6g13780.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-6 | 553130 | 555989 | + | Sp6g13780.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 70,694.78 Da | 36.64 | 94.66 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 378 | 637 | 1.31119E-85 | - |
| Pfam | PF13855 | Leucine rich repeat | 132 | 192 | 1.1E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 376 | 637 | 2.0E-36 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 202 | 9.78E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 347 | 637 | 2.7E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 643 | 2.4E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 450 | 6.0E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 105 | 228 | 2.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 104 | 6.2E-25 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 638 | 27.84894 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006401961.1 | LRR receptor kinase BAK1 [Eutrema salsugineum] | 0 |
| Q7XV05 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3I5G0 | Protein NSP-INTERACTING KINASE 2 OS=Noccaea caerulescens OX=107243 GN=LC_TR9170_c0_g1_i1_g.32926 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology