HalophFGD

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Basic Information
Locus ID: Sp6g10150.v2.2
Species & Taxonomic ID: Schrenkiella parvula & 98039
Genome Assembly: v2.2
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
ch6-3 1221011 1222239 + Sp6g10150.v2.2
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.81 34,259.47 Da 66.41 52.10 -1.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 1 26 - -
MobiDBLite mobidb-lite consensus disorder prediction 12 26 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A8T2BSF5 Retrotrans_gag domain-containing protein OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa02g018210 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Schrenkiella parvula 26 Sp1g30460.v2.2, Sp1g31270.v2.2, Sp1g31830.v2.2 ...
Sp2g06820.v2.2, Sp2g08000.v2.2, Sp3g22870.v2.2, Sp3g24010.v2.2, Sp3g25030.v2.2, Sp3g25310.v2.2, Sp4g06980.v2.2, Sp4g07460.v2.2, Sp4g09460.v2.2, Sp4g09617.v2.2, Sp5g21160.v2.2, Sp6g10080.v2.2, Sp6g10120.v2.2, Sp6g10150.v2.2, Sp7g03190.v2.2, Sp7g08700.v2.2, Sp7g10020.v2.2, Sp7g10650.v2.2, SpUn0014_0020.v2.2, SpUn0094_0030.v2.2, SpUn0667_0010.v2.2, SpUn0675_0010.v2.2, SpUn1142_0010.v2.2
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.