Basic Information
Locus ID:
Sp6g07270.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Uncharacterized protein conserved in bacteria (DUF2062)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-2 | 235768 | 237380 | - | Sp6g07270.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 19,652.30 Da | 35.99 | 112.95 | 0.59 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10140.1 | 0 | |
| RefSeq | XP_006288744.1 | uncharacterized protein LOC17882896 [Capsella rubella] | 0 |
| TrEMBL | R0FH34 | DUF2062 domain-containing protein OS=Capsella rubella OX=81985 GN=CARUB_v10002060mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg12297 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23299 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah024021 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g009810 |
| Amaranthaceae | Salicornia bigelovii | 10 | Sbi_jg28460, Sbi_jg28467, Sbi_jg28472, Sbi_jg28476 ... |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg7050 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022068 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl11723, Sgl11882, Sgl17211 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016068, gene:ENSEOMG00000034078 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1AG0012480 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30033100 |
| Apiaceae | Apium graveolens | 2 | Ag3G01527, Ag7G00487 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G021310, scaffold135149G000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103704795 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.382.V1.1, AsparagusV1_09.326.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri10G05429, Ftri2G28923, FtriNA17452 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G33490.1, AT4G10140.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10008879m.g.v1.0, Thhalv10029009m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g07270.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB04g050630.2N, BniB05g058710.2N, BniB08g052570.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1647 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1704 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g01640 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g25340 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.1261 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00037546 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G03764 |
| Poaceae | Echinochloa crus-galli | 2 | AH05.680, CH05.836 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0408640, gene-QOZ80_5BG0457040 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0094030.2 |
| Poaceae | Oryza coarctata | 2 | Oco09G000280, Oco10G000350 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g01510.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G003400 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0505836 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G014080, Chr12G022780, Chr18G003070, Chr22G016950 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G731500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG063610, gene_TRIDC1BG072840 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G433300.1, TraesCS1B02G469200.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb207120_P001, Zm00001eb289060_P005 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g27531 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g03080 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.1381 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-20114, nbisL1-mrna-20185 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13523 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13331 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.263 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011882 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9039 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18576 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606192, gene-LOC132644779 |
| Solanaceae | Solanum chilense | 2 | SOLCI004207700, SOLCI004407900 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107003085, gene-LOC107021068 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.15221_chr06_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G2159 |
| Zosteraceae | Zostera marina | 2 | Zosma02g24810.v3.1, Zosma03g36570.v3.1 |