Basic Information
Locus ID:
Sp6g05590.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-1 | 2341972 | 2343584 | - | Sp6g05590.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 40,591.78 Da | 56.97 | 91.98 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 49 | 312 | 2.2E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 313 | 1.04E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 321 | 3.2E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 120 | 4.3E-30 | - |
| SMART | SM00220 | serkin_6 | 45 | 314 | 4.4E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 45 | 315 | 37.134979 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 51 | 73 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 358 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11890.3 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009134247.2 | cysteine-rich receptor-like protein kinase 45 [Brassica rapa] | 0 |
| Q8GY82 | Cysteine-rich receptor-like protein kinase 45 OS=Arabidopsis thaliana OX=3702 GN=CRK45 PE=1 SV=1 | 0 | |
| TrEMBL | A0A397ZYP0 | Protein kinase domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_C02687 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G11890.3 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029460m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g05590.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g036970.2N |