Basic Information
Locus ID:
Sp6g05570.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-1 | 2334142 | 2336778 | + | Sp6g05570.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.24 | 52,577.72 Da | 48.41 | 74.75 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 327 | 366 | 0.03 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 285 | 321 | 8.0E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 415 | 451 | 1.3E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 171 | 459 | 3.3E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 147 | 456 | 6.2E-122 | IPR015943 |
| SMART | SM00320 | WD40_4 | 198 | 238 | 0.43 | IPR001680 |
| SMART | SM00320 | WD40_4 | 282 | 321 | 3.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 369 | 409 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 241 | 278 | 0.085 | IPR001680 |
| SMART | SM00320 | WD40_4 | 324 | 366 | 0.0024 | IPR001680 |
| SMART | SM00320 | WD40_4 | 412 | 451 | 3.2E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 289 | 321 | 10.943775 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 419 | 452 | 11.65559 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 419 | 452 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 289 | 330 | 13.549507 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 438 | 452 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11920.1 | cell cycle switch protein 52 A2. Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication. | 0 |
| RefSeq | XP_006396831.2 | protein FIZZY-RELATED 1 [Eutrema salsugineum] | 0 |
| Q8VZS9 | Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=FZR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6D2HZJ0 | WD_REPEATS_REGION domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5809 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology