Basic Information
Locus ID:
Sp6g03050.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-1 | 1189753 | 1190943 | + | Sp6g03050.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 43,128.23 Da | 37.05 | 109.07 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 2.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 2.6E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 368 | 2.55E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 263 | 8.4E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 192 | 1.0E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 264 | 369 | 5.0E-11 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 304 | 327 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 238 | 262 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 1.5 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 147 | 169 | 7.403927 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 148 | 161 | 6.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 238 | 251 | 6.9E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03010.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_013606624.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A8T1ZHZ5 | Leucine-rich repeat OS=Arabidopsis suecica OX=45249 GN=ISN44_As11g037450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology