Basic Information
Locus ID:
Sp6g02540.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch6-1 | 977638 | 979149 | + | Sp6g02540.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 56,103.10 Da | 43.22 | 91.19 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 174 | 441 | 6.63616E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 169 | 437 | 4.4E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 441 | 6.33E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 149 | 243 | 3.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 244 | 454 | 2.5E-61 | - |
| SMART | SM00220 | serkin_6 | 168 | 440 | 1.4E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 168 | 427 | 38.110222 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 174 | 196 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 291 | 303 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 489 | - | - |
| Coils | Coil | Coil | 484 | 503 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006396477.1 | probable serine/threonine-protein kinase At1g01540 [Eutrema salsugineum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1J3H5B3 | Putative serine/threonine-protein kinase OS=Noccaea caerulescens OX=107243 GN=LE_TR20926_c0_g1_i1_g.67422 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology