Basic Information
Locus ID:
Sp5g35380.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-7 | 2627529 | 2628614 | - | Sp5g35380.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 39,496.28 Da | 36.97 | 85.10 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13964 | Kelch motif | 107 | 156 | 4.5E-6 | - |
| Pfam | PF01344 | Kelch motif | 167 | 203 | 7.1E-7 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 81 | 351 | 1.31E-38 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 64 | 356 | 2.0E-33 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 0.013 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 1.6E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_009106748.1 | F-box/kelch-repeat protein At1g80440 [Brassica rapa] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A397YV81 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA07T32029Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology