Basic Information
Locus ID:
Sp5g34950.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-7 | 2495434 | 2499950 | - | Sp5g34950.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 94,858.17 Da | 56.80 | 73.58 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 68 | 238 | 2.96E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 588 | 629 | 1.5E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 587 | 637 | 3.8E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 581 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 810 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 840 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 825 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 316 | - | - |
| Coils | Coil | Coil | 777 | 797 | - | - |
| Coils | Coil | Coil | 28 | 48 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.3 | - | 0 |
| RefSeq | XP_024007674.1 | LOW QUALITY PROTEIN: glutamic acid-rich protein [Eutrema salsugineum] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A565CD07 | Tudor domain-containing protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS21977 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology