Basic Information
Locus ID:
Sp5g33980.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Contains the following InterPro domains UspA (InterPro IPR006016), Serine threonine-protein kinase domain (InterPro IPR002290), Serine-threonine tyrosine-protein kinase (InterPro IPR001245), Serine threonine-protein kinase, active site (InterPro IPR008271), Protein kinase-like domain (InterPro IPR011009), Rossmann-like alpha beta alpha sandwich fold (InterPro IPR014729), Protein kinase, catalytic domain (InterPro IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro IPR020635)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-7 | 2122739 | 2126101 | - | Sp5g33980.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 83,510.49 Da | 51.09 | 78.92 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 140 | 7.28646E-43 | - |
| Pfam | PF00582 | Universal stress protein family | 19 | 135 | 5.7E-10 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 441 | 692 | 2.2E-38 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 135 | 1.93E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 692 | 1.37E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 510 | 3.4E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 144 | 5.1E-12 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 511 | 715 | 4.1E-47 | - |
| SMART | SM00220 | serkin_6 | 438 | 697 | 2.2E-18 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 700 | 34.449516 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 215 | - | - |
| Coils | Coil | Coil | 311 | 331 | - | - |
| Coils | Coil | Coil | 371 | 400 | - | - |
| Coils | Coil | Coil | 339 | 366 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.2 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_006389938.1 | U-box domain-containing protein 35 [Eutrema salsugineum] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | V4K886 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018168mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology