Basic Information
Locus ID:
Sp5g33040.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-7 | 1753226 | 1754819 | + | Sp5g33040.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 27,692.58 Da | 39.63 | 81.44 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 8 | 96 | 4.80603E-42 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 115 | 2.3E-36 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 99 | 8.84E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 102 | 1.4E-34 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 73 | 9.090439 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_020891017.1 | membrane-anchored ubiquitin-fold protein 5 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q8GWJ6 | Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1 | 0 | |
| TrEMBL | D7KV52 | Membrane-anchored ubiquitin-fold protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_476952 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology