Basic Information
Locus ID:
Sp5g30940.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-7 | 904011 | 907064 | - | Sp5g30940.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 108,594.07 Da | 32.73 | 104.46 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14664 | STK_BAK1_like | 709 | 981 | 1.9733E-160 | - |
| Pfam | PF13855 | Leucine rich repeat | 491 | 551 | 1.4E-6 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 564 | 600 | 2.1E-7 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 78 | 2.9E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 704 | 978 | 2.6E-42 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 373 | 392 | 0.61 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 180 | 198 | 0.9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 694 | 978 | 1.19E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 398 | 628 | 6.35E-47 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 85 | 434 | 5.41E-61 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 780 | 985 | 4.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 779 | 1.0E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 322 | 1.8E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 638 | 3.3E-83 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 347 | 371 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 299 | 323 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 178 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 586 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 275 | 298 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 703 | 978 | 5.3E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 490 | 514 | 35.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 979 | 36.498947 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 373 | 394 | 7.088198 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 824 | 836 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_006390268.1 | receptor protein kinase CLAVATA1 [Eutrema salsugineum] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | V4K961 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10018069mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology