Basic Information
Locus ID:
Sp5g29860.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
CPK30
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-7 | 464297 | 466510 | - | Sp5g29860.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 61,957.44 Da | 37.60 | 86.18 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 62 | 320 | 1.00301E-137 | - |
| Pfam | PF00069 | Protein kinase domain | 65 | 321 | 3.9E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 367 | 428 | 3.1E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 439 | 502 | 9.0E-13 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 329 | 5.4E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 349 | 528 | 2.75E-45 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 64 | 148 | 7.7E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 149 | 329 | 1.0E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 330 | 505 | 1.8E-52 | - |
| SMART | SM00054 | efh_1 | 476 | 504 | 4.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 440 | 468 | 6.6E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 63 | 321 | 2.3E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 368 | 396 | 4.6E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 404 | 432 | 9.3E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 400 | 435 | 10.245409 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 436 | 471 | 15.015522 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 321 | 48.837929 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 364 | 399 | 14.039183 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 472 | 507 | 13.034948 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 377 | 389 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 92 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 449 | 461 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 485 | 497 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 413 | 425 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 183 | 195 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 41 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_006390395.1 | calcium-dependent protein kinase 30 [Eutrema salsugineum] | 0 |
| Q9SSF8 | Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CPK30 PE=1 SV=1 | 0 | |
| TrEMBL | E4MVH4 | mRNA, clone: RTFL01-02-L12 OS=Eutrema halophilum OX=98038 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology