Basic Information
Locus ID:
Sp5g21310.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-5 | 1061779 | 1064432 | + | Sp5g21310.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 54,279.96 Da | 41.27 | 94.11 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 33 | 352 | 2.0E-82 | IPR000490 |
| Pfam | PF07983 | X8 domain | 370 | 440 | 2.0E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 33 | 352 | 1.06E-86 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 32 | 359 | 3.0E-114 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 363 | 459 | 1.6E-12 | - |
| SMART | SM00768 | X8_cls | 369 | 454 | 1.3E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 267 | 280 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_013621499.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 2 isoform X2 [Brassica oleracea var. oleracea] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0D3ANC0 | glucan endo-1,3-beta-D-glucosidase OS=Brassica oleracea var. oleracea OX=109376 GN=106327794 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology