HalophFGD

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Basic Information
Locus ID: Sp5g19830.v2.2
Species & Taxonomic ID: Schrenkiella parvula & 98039
Genome Assembly: v2.2
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
ch5-5 27671 30208 - Sp5g19830.v2.2
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.35 22,340.70 Da 42.53 54.33 -0.71
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 116 135 - -
MobiDBLite mobidb-lite consensus disorder prediction 140 201 - -
MobiDBLite mobidb-lite consensus disorder prediction 157 193 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A1J3DVG5 DUF629 domain-containing protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR6230_c0_g1_i1_g.20385 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Schrenkiella parvula 123 Sp1g29790.v2.2, Sp1g29840.v2.2, Sp1g29850.v2.2 ...
Sp1g30330.v2.2, Sp1g30830.v2.2, Sp1g30860.v2.2, Sp1g30910.v2.2, Sp1g30970.v2.2, Sp1g31000.v2.2, Sp1g31330.v2.2, Sp1g31460.v2.2, Sp1g31630.v2.2, Sp2g06350.v2.2, Sp2g06600.v2.2, Sp2g06760.v2.2, Sp2g06800.v2.2, Sp2g06810.v2.2, Sp2g07210.v2.2, Sp2g08260.v2.2, Sp3g23990.v2.2, Sp3g24410.v2.2, Sp3g24650.v2.2, Sp3g25010.v2.2, Sp3g25070.v2.2, Sp3g25100.v2.2, Sp3g25150.v2.2, Sp3g26000.v2.2, Sp3g26440.v2.2, Sp3g26740.v2.2, Sp3g26910.v2.2, Sp3g26920.v2.2, Sp3g29530.v2.2, Sp4g05370.v2.2, Sp4g05600.v2.2, Sp4g06610.v2.2, Sp4g06620.v2.2, Sp4g06920.v2.2, Sp4g06930.v2.2, Sp4g07170.v2.2, Sp4g07180.v2.2, Sp4g08410.v2.2, Sp4g08420.v2.2, Sp4g08520.v2.2, Sp4g08790.v2.2, Sp4g09090.v2.2, Sp4g09530.v2.2, Sp4g09540.v2.2, Sp4g09590.v2.2, Sp5g17060.v2.2, Sp5g18140.v2.2, Sp5g18330.v2.2, Sp5g18350.v2.2, Sp5g18590.v2.2, Sp5g18600.v2.2, Sp5g19030.v2.2, Sp5g19160.v2.2, Sp5g19280.v2.2, Sp5g19330.v2.2, Sp5g19350.v2.2, Sp5g19460.v2.2, Sp5g19820.v2.2, Sp5g19830.v2.2, Sp5g20130.v2.2, Sp5g20170.v2.2, Sp5g20250.v2.2, Sp5g20900.v2.2, Sp6g10210.v2.2, Sp6g10250.v2.2, Sp6g10340.v2.2, Sp6g10550.v2.2, Sp6g10750.v2.2, Sp6g10760.v2.2, Sp6g11010.v2.2, Sp6g11470.v2.2, Sp6g11700.v2.2, Sp6g11750.v2.2, Sp6g12190.v2.2, Sp6g12240.v2.2, Sp6g12250.v2.2, Sp6g12503.v2.2, Sp7g05210.v2.2, Sp7g05220.v2.2, Sp7g05430.v2.2, Sp7g05560.v2.2, Sp7g05850.v2.2, Sp7g06480.v2.2, Sp7g06490.v2.2, Sp7g06730.v2.2, Sp7g07000.v2.2, Sp7g07440.v2.2, Sp7g07540.v2.2, Sp7g08170.v2.2, Sp7g08330.v2.2, Sp7g09230.v2.2, Sp7g10400.v2.2, Sp7g10450.v2.2, SpUn0001_0300.v2.2, SpUn0001_0420.v2.2, SpUn0001_0560.v2.2, SpUn0001_0580.v2.2, SpUn0001_0640.v2.2, SpUn0001_0650.v2.2, SpUn0002_0090.v2.2, SpUn0002_0790.v2.2, SpUn0003_0180.v2.2, SpUn0003_0210.v2.2, SpUn0003_0340.v2.2, SpUn0003_0350.v2.2, SpUn0004_0160.v2.2, SpUn0015_0170.v2.2, SpUn0025_0030.v2.2, SpUn0053_0070.v2.2, SpUn0094_0010.v2.2, SpUn0104_0010.v2.2, SpUn0126_0010.v2.2, SpUn0207_0010.v2.2, SpUn0207_0020.v2.2, SpUn0320_0010.v2.2, SpUn0759_0010.v2.2, SpUn0812_0010.v2.2, SpUn1006_0010.v2.2, SpUn1060_0010.v2.2, SpUn1232_0010.v2.2
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.