Basic Information
Locus ID:
Sp5g19210.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
DNA RNA polymerases superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-4 | 314037 | 317927 | - | Sp5g19210.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 47,661.60 Da | 42.76 | 72.71 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 407 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024010582.1 | uncharacterized protein LOC112085996, partial [Eutrema salsugineum] | 0 |
| TrEMBL | A0A8T2AF01 | Integrase catalytic core OS=Arabidopsis suecica OX=45249 GN=ISN44_As09g004270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 82 | Sp1g24500.v2.2, Sp1g24510.v2.2, Sp1g30380.v2.2 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g20010 |