Basic Information
Locus ID:
Sp5g11670.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-1 | 4357887 | 4361327 | - | Sp5g11670.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 68,080.67 Da | 49.40 | 79.82 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 162 | 423 | 1.73523E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 162 | 424 | 1.3E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 452 | 606 | 1.57E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 459 | 5.13E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 449 | 603 | 2.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 252 | 440 | 9.7E-63 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 442 | 533 | 2.9E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 155 | 251 | 2.4E-22 | - |
| SMART | SM00220 | serkin_6 | 162 | 424 | 7.4E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 162 | 424 | 51.523388 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 286 | 298 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 168 | 194 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 100 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_006404024.1 | CDPK-related kinase 5 isoform X2 [Eutrema salsugineum] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | V4LSN8 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10010211mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology