Basic Information
Locus ID:
Sp5g08970.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-1 | 3337312 | 3339462 | + | Sp5g08970.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 77,377.43 Da | 38.82 | 84.80 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 24 | 247 | 1.12478E-85 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 383 | 652 | 9.71082E-95 | - |
| Pfam | PF00139 | Legume lectin domain | 24 | 254 | 8.3E-59 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 377 | 650 | 3.2E-53 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 253 | 1.12E-59 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 359 | 685 | 9.85E-84 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 22 | 259 | 1.2E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 674 | 2.8E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 453 | 4.9E-30 | - |
| SMART | SM00220 | serkin_6 | 377 | 652 | 5.7E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 377 | 677 | 39.509491 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 497 | 509 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 383 | 406 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 136 | 142 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 302 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_013613776.1 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Brassica oleracea var. oleracea] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3P6C754 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC4T25493H PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology