Basic Information
Locus ID:
Sp5g02200.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
UBP21
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-1 | 760567 | 761240 | - | Sp5g02200.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 8,609.59 Da | 58.42 | 66.71 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 2 | 68 | 2.6E-12 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 2 | 68 | 5.49E-16 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 70 | 2.9E-17 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 73 | 14.854238 | IPR028889 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46740.2 | - | 0 |
| RefSeq | XP_010481420.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Camelina sativa] | 0 |
| Q9FIQ1 | Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana OX=3702 GN=UBP21 PE=2 SV=1 | 0 | |
| TrEMBL | V4LBQ3 | Ubiquitin carboxyl-terminal hydrolase OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10000790mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||