Basic Information
Locus ID:
Sp5g00250.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch5-1 | 82944 | 85718 | - | Sp5g00250.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 63,536.94 Da | 55.46 | 76.26 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 258 | 6.78712E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 257 | 2.9E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 321 | 8.09E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 83 | 1.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 318 | 1.8E-57 | - |
| SMART | SM00220 | serkin_6 | 4 | 258 | 2.0E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 258 | 46.279675 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 386 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63280.1 | NIMA-related kinase 4. Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_020882111.1 | serine/threonine-protein kinase Nek4 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q8RXT4 | Serine/threonine-protein kinase Nek4 OS=Arabidopsis thaliana OX=3702 GN=NEK4 PE=2 SV=1 | 0 | |
| TrEMBL | D7LTP5 | Kinase family protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_486833 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology