Basic Information
Locus ID:
Sp4g28520.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
phosphatidylinositol 3- and 4-kinase family protein ubiquitin family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 7773729 | 7776226 | - | Sp4g28520.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 63,900.40 Da | 47.98 | 84.18 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 115 | 182 | 6.85156E-8 | - |
| Pfam | PF00240 | Ubiquitin family | 115 | 185 | 1.7E-8 | IPR000626 |
| Pfam | PF00240 | Ubiquitin family | 40 | 107 | 3.1E-15 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 269 | 518 | 5.1E-55 | IPR000403 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 566 | 1.94E-5 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 87 | 184 | 6.68E-17 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 30 | 108 | 5.07E-15 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 113 | 199 | 2.0E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 35 | 112 | 1.7E-13 | - |
| SMART | SM00213 | ubq_7 | 111 | 184 | 0.36 | IPR000626 |
| SMART | SM00213 | ubq_7 | 34 | 106 | 0.0061 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 35 | 106 | 13.118888 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 113 | 188 | 12.879359 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 87 | 108 | 2.9E-5 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 44 | 64 | 2.9E-5 | IPR019956 |
| Coils | Coil | Coil | 523 | 543 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46500.1 | phosphoinositide 4-kinase gamma 4. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. | 0 |
| RefSeq | XP_006293911.1 | phosphatidylinositol 4-kinase gamma 4 [Capsella rubella] | 0 |
| Q9ZPY9 | Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana OX=3702 GN=PI4KG4 PE=1 SV=1 | 0 | |
| TrEMBL | R0HBJ2 | 1-phosphatidylinositol 4-kinase OS=Capsella rubella OX=81985 GN=CARUB_v10022902mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology