Basic Information
Locus ID:
Sp4g27380.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 7387126 | 7389853 | + | Sp4g27380.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 75,624.36 Da | 35.27 | 94.44 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 424 | 688 | 1.81775E-105 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 422 | 685 | 6.2E-38 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 66 | 3.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 201 | 6.1E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 687 | 7.97E-56 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 237 | 9.23E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 692 | 9.9E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 260 | 4.3E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 496 | 1.2E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 135 | 6.0E-31 | IPR032675 |
| SMART | SM00220 | serkin_6 | 418 | 661 | 1.2E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 418 | 692 | 28.174021 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 303 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006397716.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Eutrema salsugineum] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4L696 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10001341mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology