Basic Information
Locus ID:
Sp4g26210.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 6962071 | 6963345 | + | Sp4g26210.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 47,280.64 Da | 60.27 | 68.28 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 206 | 251 | 4.4E-12 | IPR006652 |
| Pfam | PF00646 | F-box domain | 22 | 64 | 4.8E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 66 | 6.15E-10 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 128 | 411 | 1.83E-34 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 125 | 422 | 9.8E-33 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 9 | 121 | 2.7E-5 | - |
| SMART | SM00256 | fbox_2 | 25 | 65 | 4.1E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 218 | 265 | 6.3E-8 | IPR006652 |
| SMART | SM00612 | kelc_smart | 164 | 216 | 0.33 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 123 | - | - |
| Coils | Coil | Coil | 96 | 116 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_024010744.1 | F-box/kelch-repeat protein At2g44130 [Eutrema salsugineum] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1J3H518 | F-box/kelch-repeat protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=LE_TR3073_c0_g1_i1_g.10169 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology