Basic Information
Locus ID:
Sp4g23450.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 5931861 | 5935150 | + | Sp4g23450.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 64,410.23 Da | 45.42 | 85.86 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 123 | 385 | 3.98887E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 124 | 386 | 2.8E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 414 | 568 | 7.84E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 121 | 448 | 1.75E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 211 | 405 | 1.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 120 | 210 | 9.4E-23 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 406 | 568 | 7.4E-14 | - |
| SMART | SM00220 | serkin_6 | 124 | 386 | 1.1E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 386 | 49.784908 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 156 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 248 | 260 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_006411380.1 | CDPK-related kinase 1 [Eutrema salsugineum] | 0 |
| O80673 | CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1 | 0 | |
| TrEMBL | V4MJM8 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016437mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology