Basic Information
Locus ID:
Sp4g18660.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 3931746 | 3937701 | + | Sp4g18660.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 86,887.85 Da | 44.15 | 105.36 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07707 | BTB And C-terminal Kelch | 4 | 77 | 1.7E-5 | IPR011705 |
| SUPERFAMILY | SSF52047 | RNI-like | 294 | 695 | 1.1E-26 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 1 | 104 | 1.8E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 377 | 739 | 1.7E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 277 | 376 | 1.4E-10 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 552 | 576 | 43.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 435 | 459 | 690.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 386 | 411 | 14.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 577 | 600 | 540.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 628 | 653 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 322 | 347 | 31.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 348 | 372 | 110.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 296 | 321 | 290.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 654 | 679 | 650.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 216 | 241 | 700.0 | IPR006553 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36370.1 | ubiquitin-protein ligases. | 0 |
| RefSeq | XP_006410814.2 | BTB/POZ domain-containing protein FBL11 isoform X2 [Eutrema salsugineum] | 0 |
| Q8S8F2 | BTB/POZ domain-containing protein FBL11 OS=Arabidopsis thaliana OX=3702 GN=FBL11 PE=2 SV=2 | 0 | |
| TrEMBL | V4MAV1 | BTB domain-containing protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10017885mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31967 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14434 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031001 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g159950 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg27352, Sbi_jg33097 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg7849 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012250 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71441, Sgl75029 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000006385, gene:ENSEOMG00000036350 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7BG0022610 |
| Apiaceae | Apium graveolens | 1 | Ag4G01480 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103706161 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_09.9.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G29101 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G36370.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017885m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g18660.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g008100.2N, BniB01p000012.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G1479, Ceq02G1480 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1537 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g08770 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g11230 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2099 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00004885 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09722 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.4637, BH02.4703, Contig926_1.11 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1BG0097920, gene-QOZ80_1BG0097930 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0327040.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_058529 |
| Poaceae | Oryza coarctata | 2 | Oco01G030880, Oco02G032020 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g73750.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G416700 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0103017, Pt_Chr0304368, Pt_Chr0304443, Pt_Chr0601025 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr02G000310, Chr05G034500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G873700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG073610, gene_TRIDC3BG084860 |
| Poaceae | Triticum aestivum | 4 | TraesCS3A02G520000.4, TraesCS3B02G587700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb139990_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28068 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12006 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG02.1735, evm.TU.LG02.1736, evm.TU.LG09.192 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g22730 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1439 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6153 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4515 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.469 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016945 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7643 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-445 |
| Solanaceae | Solanum chilense | 1 | SOLCI003411700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107031859 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5675 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G2499 |