Basic Information
Locus ID:
Sp4g14040.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 2141110 | 2142124 | - | Sp4g14040.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 14,373.54 Da | 40.06 | 93.52 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02413 | 40S_S3_KH | 63 | 118 | 7.28196E-35 | - |
| Pfam | PF07650 | KH domain | 68 | 118 | 1.3E-8 | IPR004044 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 58 | 119 | 3.27E-17 | IPR009019 |
| Gene3D | G3DSA:3.30.300.20 | - | 46 | 120 | 3.0E-37 | IPR015946 |
| ProSiteProfiles | PS50823 | Type-2 KH domain profile. | 69 | 118 | 9.72822 | IPR004044 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35530.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_021664469.1 | 40S ribosomal protein S3-1 [Hevea brasiliensis] | 0 |
| Q9FJA6 | Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3IJR2 | 40S ribosomal protein S3-3 (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR25868_c1_g1_i1_g.75501 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology