Basic Information
Locus ID:
Sp4g13960.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Short Name:
CPK24
Description:
ATP binding calcium ion binding calmodulin-dependent protein kinase kinase protein kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 2113033 | 2115398 | + | Sp4g13960.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 64,839.47 Da | 40.95 | 79.04 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 65 | 314 | 1.02882E-125 | - |
| Pfam | PF13499 | EF-hand domain pair | 433 | 497 | 1.6E-12 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 376 | 422 | 1.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 66 | 315 | 1.3E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 65 | 316 | 2.29E-81 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 496 | 1.43E-40 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 142 | 7.4E-20 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 324 | 500 | 2.5E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 323 | 7.8E-60 | - |
| SMART | SM00054 | efh_1 | 434 | 462 | 3.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 471 | 499 | 1.1E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 362 | 390 | 2.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 398 | 426 | 0.26 | IPR002048 |
| SMART | SM00220 | serkin_6 | 66 | 315 | 2.2E-91 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 66 | 315 | 47.155983 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 394 | 429 | 9.073802 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 13.871811 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 358 | 393 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 13.564962 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 443 | 455 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 407 | 419 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 371 | 383 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_006410285.1 | calcium-dependent protein kinase 24 isoform X1 [Eutrema salsugineum] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | V4MGQ3 | Calcium-dependent protein kinase 24 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10016430mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology