Basic Information
Locus ID:
Sp4g13420.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
receptor-like protein kinase At2g30940
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch4-6 | 1862475 | 1864292 | + | Sp4g13420.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 51,644.24 Da | 45.78 | 99.36 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 171 | 304 | 1.0E-18 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 140 | 418 | 1.28E-47 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 137 | 238 | 4.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 239 | 308 | 4.2E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 317 | 432 | 8.0E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 166 | 424 | 18.138882 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30940.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006410194.1 | putative receptor-like protein kinase At2g30940 [Eutrema salsugineum] | 0 |
| Q3EBR4 | Putative receptor-like protein kinase At2g30940 OS=Arabidopsis thaliana OX=3702 GN=At2g30940 PE=3 SV=2 | 0 | |
| TrEMBL | V4M995 | Protein kinase domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10017785mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G30940.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017785m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g13420.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB04g060120.2N, BniB06g019980.2N, BniB06g020040.2N |