Basic Information
Locus ID:
Sp3g34100.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-6 | 1530572 | 1534127 | - | Sp3g34100.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 79,556.05 Da | 41.25 | 92.41 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 1.2E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 446 | 717 | 1.0E-40 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 238 | 3.74E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 423 | 717 | 8.2E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 406 | 520 | 1.7E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 245 | 2.1E-12 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 521 | 729 | 6.8E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 166 | 4.2E-23 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 443 | 721 | 33.658016 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 304 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | NP_565489.2 | STRUBBELIG-receptor family 1 [Arabidopsis thaliana] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T2BCN5 | Leucine-rich repeat OS=Arabidopsis suecica OX=45249 GN=ISN44_As08g040270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology