Basic Information
Locus ID:
Sp3g31090.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-6 | 241399 | 244983 | - | Sp3g31090.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 61,621.61 Da | 47.51 | 87.11 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 292 | 535 | 2.40453E-135 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 286 | 535 | 1.2E-72 | IPR001245 |
| SUPERFAMILY | SSF55021 | ACT-like | 170 | 236 | 5.83E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 261 | 535 | 1.2E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 365 | 545 | 1.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 275 | 364 | 2.4E-30 | - |
| Gene3D | G3DSA:3.30.70.260 | - | 173 | 247 | 5.3E-5 | - |
| SMART | SM00220 | serkin_6 | 286 | 539 | 1.3E-64 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 174 | 249 | 14.103779 | IPR002912 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 286 | 539 | 44.95108 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 292 | 313 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 403 | 415 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 462 | 484 | 8.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 360 | 373 | 8.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 397 | 415 | 8.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 506 | 528 | 8.5E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 443 | 453 | 8.5E-17 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 131 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17700.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_013661430.1 | serine/threonine-protein kinase STY8 [Brassica napus] | 0 |
| O22558 | Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1J3J0B9 | Serine/threonine-protein kinase HT1 OS=Noccaea caerulescens OX=107243 GN=MP_TR17277_c0_g1_i1_g.49126 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology