Basic Information
Locus ID:
Sp3g30103.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-5 | 2866192 | 2869549 | + | Sp3g30103.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 61,516.77 Da | 38.50 | 80.47 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 340 | 466 | 6.29181E-67 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 21 | 232 | 6.6E-84 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 276 | 511 | 2.8E-60 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 29 | 512 | 2.0E-223 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 293 | 477 | 2.0E-223 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 29 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_018433685.1 | PREDICTED: proteinaceous RNase P 2 [Raphanus sativus] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0JDK6 | ribonuclease P OS=Raphanus sativus OX=3726 GN=LOC108806147 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology