Basic Information
Locus ID:
Sp3g29200.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
transcription, DNA-templated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-5 | 2361911 | 2363371 | - | Sp3g29200.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 16,924.46 Da | 46.01 | 98.08 | -0.19 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22280.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_013616796.1 | PREDICTED: F-box/LRR-repeat protein At3g58980-like [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A087G752 | FBD domain-containing protein OS=Arabis alpina OX=50452 GN=AALP_AA8G148100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 8 | AT1G21990.1, AT1G47920.1, AT1G48390.1, AT1G48400.1 ... |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10012238m.g.v1.0, Thhalv10013291m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g29200.v2.2 |
| Brassicaceae | Brassica nigra | 18 | BniB01g014250.2N, BniB02g013580.2N, BniB02g052700.2N ... |