Basic Information
Locus ID:
Sp3g25030.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Replication factor-A C terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-3 | 805281 | 806092 | - | Sp3g25030.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 29,888.55 Da | 61.09 | 78.44 | -0.74 |
Protein Domain:
KEGG Pathway
KO Term:
Pathway:
ko03030 (DNA replication)
map03030 (DNA replication)
ko03420 (Nucleotide excision repair)
map03420 (Nucleotide excision repair)
ko03430 (Mismatch repair)
map03430 (Mismatch repair)
ko03440 (Homologous recombination)
map03440 (Homologous recombination)
ko03460 (Fanconi anemia pathway)
map03460 (Fanconi anemia pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020878497.1 | uncharacterized protein LOC110227679 [Arabidopsis lyrata subsp. lyrata] | 0 |
| TrEMBL | A0A8T2A726 | Zinc finger CCHC-type OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa04g005820 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 26 | Sp1g30460.v2.2, Sp1g31270.v2.2, Sp1g31830.v2.2 ... |