Basic Information
Locus ID:
Sp3g24140.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-3 | 184199 | 184876 | + | Sp3g24140.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 26,112.81 Da | 41.23 | 85.73 | -0.17 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05970.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_033144575.1 | F-box protein At2g05970 [Brassica rapa] | 0 |
| Q9ZUF1 | F-box protein At2g05970 OS=Arabidopsis thaliana OX=3702 GN=At2g05970 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6D2JFQ2 | F-box domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS25866 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 36 | AT1G10110.1, AT1G27540.1, AT1G27550.1, AT1G27580.1 ... |
| Brassicaceae | Eutrema salsugineum | 24 | Thhalv10002155m.g.v1.0, Thhalv10003011m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp3g02700.v2.2, Sp3g24140.v2.2, Sp3g33180.v2.2 ... |
| Brassicaceae | Brassica nigra | 32 | BniB01g011090.2N, BniB02g015840.2N, BniB02g015860.2N ... |