Basic Information
Locus ID:
Sp3g21460.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-2 | 49398 | 52354 | + | Sp3g21460.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 100,684.84 Da | 39.34 | 86.46 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 590 | 863 | 2.81812E-93 | - |
| Pfam | PF13855 | Leucine rich repeat | 368 | 424 | 2.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 60 | 8.3E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 587 | 858 | 8.5E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 322 | 360 | 0.038 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 88 | 145 | 6.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 431 | 1.48E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 560 | 864 | 6.57E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 662 | 886 | 4.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 549 | 661 | 2.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 445 | 1.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 319 | 1.1E-66 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 12.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 584 | 864 | 6.1E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 15.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 584 | 864 | 41.134899 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 709 | 721 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 590 | 612 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 475 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 935 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006418841.1 | receptor-like kinase TMK4 [Eutrema salsugineum] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J3G0R0 | Putative receptor protein kinase TMK1 OS=Noccaea caerulescens OX=107243 GN=LC_TR12649_c0_g1_i1_g.44243 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology