Basic Information
Locus ID:
Sp3g18880.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 6748173 | 6750504 | + | Sp3g18880.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 49,644.76 Da | 48.07 | 81.49 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 14 | 268 | 7.42637E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 15 | 267 | 6.4E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 294 | 1.75E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 96 | 360 | 1.4E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 93 | 4.3E-24 | - |
| SMART | SM00220 | serkin_6 | 15 | 268 | 6.0E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 268 | 46.350346 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 135 | 147 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 350 | - | - |
| Coils | Coil | Coil | 362 | 382 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_018491257.1 | PREDICTED: serine/threonine-protein kinase Nek6 [Raphanus sativus] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1J3GXQ2 | Serine/threonine-protein kinase Nek6 OS=Noccaea caerulescens OX=107243 GN=LE_TR12573_c0_g1_i1_g.40978 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology