Basic Information
Locus ID:
Sp3g18230.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 6491648 | 6495137 | + | Sp3g18230.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 68,575.78 Da | 49.98 | 70.84 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 297 | 549 | 5.2E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 549 | 1.75E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 367 | 4.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 368 | 573 | 4.8E-50 | - |
| SMART | SM00220 | serkin_6 | 295 | 554 | 4.4E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 571 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 609 | - | - |
| Coils | Coil | Coil | 175 | 221 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20200.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_006406411.1 | U-box domain-containing protein 35 [Eutrema salsugineum] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1J3HVD2 | U-box domain-containing protein 34 OS=Noccaea caerulescens OX=107243 GN=GA_TR11161_c0_g1_i1_g.36053 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology