Basic Information
Locus ID:
Sp3g15800.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 5545203 | 5546245 | + | Sp3g15800.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 15,893.15 Da | 38.57 | 52.48 | -0.69 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17668.1 | DnaJ/Hsp40 cysteine-rich domain superfamily protein. | 0 |
| RefSeq | XP_013675366.1 | uncharacterized protein BNAA01G27880D isoform X1 [Brassica napus] | 0 |
| TrEMBL | A0A6D2KG59 | Protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS38506 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29767 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_1269 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah021070, Ah023371 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg29050, Sbi_jg3270 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg6661 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000086 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl11522, Sgl17020 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013060, gene:ENSEOMG00000033812 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0008000, CQ.Regalona.r1.2BG0021470 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049950 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G004210 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G04126 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G17668.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10021734m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g15800.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g047160.2N, BniB07g052440.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno18g05870 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0630s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g04610 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.8 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00032540 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G01761 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2104, BH09.2271, CH09.2416 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0196830.1 |
| Poaceae | Oryza coarctata | 2 | Oco07G014430, Oco08G013880 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g49940.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G207800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0301570, Pt_Chr0302093 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr30G004310 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G766400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG064400, gene_TRIDC2BG068690 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G451100.1, TraesCS2B02G472600.1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-22693 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20327 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG19.474, evm.TU.LG23.48, evm.TU.LG24.614 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g00180 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.20 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-14527 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000005l.363 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009960 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-223 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-22100 |
| Salicaceae | Populus euphratica | 4 | populus_peu26698, populus_peu26744, populus_peu37834 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132611341 |
| Solanaceae | Solanum chilense | 1 | SOLCI005525300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021628 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.32729_chr09_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G0227 |
| Zosteraceae | Zostera marina | 1 | Zosma06g01150.v3.1 |