Basic Information
Locus ID:
Sp3g15770.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 5537635 | 5538825 | + | Sp3g15770.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 43,276.12 Da | 36.94 | 100.93 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 115 | 174 | 2.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 63 | 2.6E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 375 | 7.82E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 183 | 1.3E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 366 | 1.6E-28 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 140 | 153 | 2.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 227 | 240 | 2.6E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_006406709.1 | LRR receptor-like serine/threonine-protein kinase ERECTA [Eutrema salsugineum] | 0 |
| TrEMBL | A0A6D2KHB0 | LRRNT_2 domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS38503 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology