Basic Information
Locus ID:
Sp3g13960.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Glutaredoxin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 4881832 | 4883632 | - | Sp3g13960.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 18,988.24 Da | 49.48 | 77.03 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03028 | GRX_PICOT_like | 70 | 159 | 8.77058E-53 | IPR033658 |
| Pfam | PF00462 | Glutaredoxin | 79 | 143 | 2.8E-17 | IPR002109 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 65 | 165 | 7.35E-32 | IPR036249 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 70 | 172 | 6.2E-35 | - |
| TIGRFAM | TIGR00365 | TIGR00365: monothiol glutaredoxin, Grx4 family | 68 | 163 | 1.9E-37 | IPR004480 |
| ProSiteProfiles | PS51354 | Glutaredoxin domain profile. | 67 | 169 | 25.671371 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 63 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15660.1 | glutaredoxin 4. | 0 |
| RefSeq | XP_006406937.1 | monothiol glutaredoxin-S15, mitochondrial [Eutrema salsugineum] | 0 |
| Q8LBK6 | Monothiol glutaredoxin-S15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GRXS15 PE=1 SV=2 | 0 | |
| TrEMBL | V4LD55 | Glutaredoxin domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021647mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34285 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_16098, gene_22154 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah023919, Ah032556 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g009150 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg29302, Sbi_jg3538 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg6422 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000877 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl11777, Sgl11936, Sgl17266 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015252, gene:ENSEOMG00000033336 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1AG0012130 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30127670, pistato.v30128730 |
| Apiaceae | Apium graveolens | 1 | Ag9G01162 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708782 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.709.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri4G24375, Ftri8G01387 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G15660.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10021647m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g13960.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g049220.2N, BniB07g054050.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0275 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0290 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g13380 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0049s00022.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g13090 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1854 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00030888 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G15333, Lb2G15334 |
| Poaceae | Echinochloa crus-galli | 5 | AH02.467, BH02.492, BH09.1422, CH02.534, CH09.1527 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0011600, gene-QOZ80_1BG0060240 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0241230.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_050554 |
| Poaceae | Oryza coarctata | 2 | Oco01G011830, Oco02G012090 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g07950.1, LOC_Os01g34620.2 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_03G045400, gene-BS78_06G129200 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0700078 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr03G005330, Chr05G010850, Chr08G005820, Chr23G011030 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G217700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG015940, gene_TRIDC3BG020800 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G127900.1, TraesCS3B02G147100.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb319160_P001, Zm00001eb336840_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13170, nbis-gene-6832, nbis-gene-7440 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10047, Zma_g21439 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG16.1511, evm.TU.LG19.701, evm.TU.LG26.152 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g24960 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_10_RagTag.1211 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-28062, nbisL1-mrna-6852, nbisL1-mrna-6915 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18920 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7878 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000004l.354, evm.TU.utg000023l.186 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00004006, Maker00018873 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-16352, nbisL1-mrna-7295 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-18059, nbisL1-mrna-21223 |
| Salicaceae | Populus euphratica | 1 | populus_peu33737 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132598638 |
| Solanaceae | Solanum chilense | 1 | SOLCI004752800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021241 |
| Tamaricaceae | Reaumuria soongarica | 3 | MSTRG.4076_chr02_+, STRG.12091_chr02_+, gene_15070 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G2463 |
| Zosteraceae | Zostera marina | 1 | Zosma05g28730.v3.1 |