Basic Information
Locus ID:
Sp3g12630.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 4378559 | 4378996 | - | Sp3g12630.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.74 | 16,719.83 Da | 35.73 | 94.00 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 90 | 133 | 2.55412E-16 | - |
| Pfam | PF13639 | Ring finger domain | 90 | 133 | 8.9E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 71 | 139 | 8.16E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 137 | 5.1E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 91 | 132 | 1.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 91 | 133 | 12.061441 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14320.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_018488272.1 | PREDICTED: putative RING-H2 finger protein ATL61 [Raphanus sativus] | 0 |
| Q9LUL6 | Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana OX=3702 GN=ATL61 PE=3 SV=1 | 0 | |
| TrEMBL | A0A398A8E9 | RING-type E3 ubiquitin transferase OS=Brassica campestris OX=3711 GN=BRARA_C03520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology