Basic Information
Locus ID:
Sp3g11770.v2.2
Species & Taxonomic ID:
Schrenkiella parvula & 98039
Genome Assembly:
v2.2
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ch3-1 | 4034307 | 4037255 | - | Sp3g11770.v2.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 53,435.24 Da | 38.69 | 90.78 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 362 | 432 | 5.4E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 26 | 345 | 3.8E-78 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 26 | 346 | 8.66E-79 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 354 | 457 | 3.9E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 25 | 352 | 1.4E-109 | - |
| SMART | SM00768 | X8_cls | 361 | 446 | 8.9E-46 | IPR012946 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 5.0 | - |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 260 | 273 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | NP_001326916.1 | O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2AVL3 | glucan endo-1,3-beta-D-glucosidase OS=Arabidopsis thaliana x Arabidopsis arenosa OX=1240361 GN=ISN45_Aa03g014090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology